6PG9
WDR5delta23 bound to N-(4-(5-(hydroxymethyl)-1H-imidazol-2-yl)butyl)benzamide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-08-16 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.95370 |
Spacegroup name | P 1 |
Unit cell lengths | 46.915, 61.493, 64.757 |
Unit cell angles | 110.56, 91.06, 112.38 |
Refinement procedure
Resolution | 52.420 - 1.750 |
R-factor | 0.23435 |
Rwork | 0.233 |
R-free | 0.26877 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6pg3 |
RMSD bond length | 0.009 |
RMSD bond angle | 1.430 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 52.420 | 1.790 |
High resolution limit [Å] | 1.750 | 1.750 |
Number of reflections | 62036 | 3516 |
<I/σ(I)> | 4.4 | 2 |
Completeness [%] | 99.9 | 100 |
Redundancy | 3.7 | 3.8 |
CC(1/2) | 0.970 | 0.781 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 281 | 0.182 M ammonium fluoride, 0.1 soidum cacodylate (pH 5.79), 22.1 %w/v PEG8000 |