Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6PDU

Vaccine-elicited NHP FP-targeting antibody 13N024-a.01 in complex with HIV fusion peptide (residue 512-519)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2017-06-01
DetectorDECTRIS EIGER X 16M
Wavelength(s)1
Spacegroup nameP 21 21 21
Unit cell lengths69.032, 74.203, 93.914
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution39.679 - 1.953
R-factor0.1744
Rwork0.173
R-free0.21070
Structure solution methodMOLECULAR REPLACEMENT
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.13_2998)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.980
High resolution limit [Å]1.9505.2901.950
Rmerge0.0980.0500.534
Rmeas0.1060.0540.594
Rpim0.0400.0210.256
Total number of observations240628
Number of reflections3565319401747
<I/σ(I)>6.6
Completeness [%]99.899.798.5
Redundancy6.76.65.1
CC(1/2)0.9980.809
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2980.5M NaCl, 10% PEG 400, 20% PEG 8000, 0.1M Na acetate pH 5.5

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon