6PCO
Mechanism for regulation of DNA binding of Bordetella bronchiseptica BpsR by 6-hydroxynicotinic acid
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2012-10-08 |
Detector | RIGAKU SATURN 92 |
Wavelength(s) | 1.54 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 71.870, 90.523, 103.051 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.030 - 2.750 |
R-factor | 0.23479 |
Rwork | 0.231 |
R-free | 0.30139 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2nnn |
RMSD bond length | 0.008 |
RMSD bond angle | 1.217 |
Data reduction software | HKL-3000 (717.1) |
Data scaling software | HKL-3000 (717.1) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0230) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 34.030 | 2.850 |
High resolution limit [Å] | 2.650 | 2.750 |
Rmerge | 0.058 | 0.549 |
Rmeas | 0.068 | 0.642 |
Rpim | 0.034 | 0.330 |
Number of reflections | 17964 | 1712 |
<I/σ(I)> | 23.4 | 4.38 |
Completeness [%] | 98.7 | 97.44 |
Redundancy | 1.1 | 1.1 |
CC(1/2) | 0.999 | 0.906 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 285 | 18% PEG 2250, 0.2 M potassium formate, and 15% butanediol |