6PC9
Crystal Structure of EcDsbA in a complex with purified methylpiperazinone 6
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX2 |
Synchrotron site | Australian Synchrotron |
Beamline | MX2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-07-12 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 0.95373 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 60.534, 76.711, 86.205 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 43.100 - 2.300 |
R-factor | 0.1977 |
Rwork | 0.195 |
R-free | 0.24380 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1dsb |
RMSD bond length | 0.005 |
RMSD bond angle | 0.763 |
Data reduction software | XDS |
Data scaling software | Aimless (1.11.12) |
Phasing software | PHASER (2.8.2) |
Refinement software | PHENIX (1.18_3845) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.520 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.086 | 0.735 |
Rmeas | 0.093 | 0.797 |
Rpim | 0.035 | 0.306 |
Number of reflections | 18356 | 1730 |
<I/σ(I)> | 18.1 | |
Completeness [%] | 99.6 | 96.7 |
Redundancy | 13.2 | 12.3 |
CC(1/2) | 0.999 | 0.891 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 25-35 % PEG MME 2000, 100-300 mM KBr |