6PBD
DNA N6-Adenine Methyltransferase CcrM In Complex with Double-Stranded DNA Oligonucleotide Containing Its Recognition Sequence GAATC
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 22-ID |
| Synchrotron site | APS |
| Beamline | 22-ID |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2018-12-16 |
| Detector | DECTRIS EIGER X 16M |
| Wavelength(s) | 1.00000 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 67.683, 117.939, 119.598 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 41.675 - 2.343 |
| R-factor | 0.1748 |
| Rwork | 0.173 |
| R-free | 0.20820 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 1g60 |
| RMSD bond length | 0.003 |
| RMSD bond angle | 0.532 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Phasing software | PHENIX |
| Refinement software | PHENIX ((1.15.2_3472: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 41.680 | 2.430 |
| High resolution limit [Å] | 2.343 | 2.343 |
| Rmerge | 0.113 | 0.766 |
| Rpim | 0.035 | 0.398 |
| Number of reflections | 40730 | 3929 |
| <I/σ(I)> | 19.7 | 1.9 |
| Completeness [%] | 99.7 | 97.7 |
| Redundancy | 10.2 | 4 |
| CC(1/2) | 0.753 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7.8 | 292 | 0.1 M HEPES, pH 7.8, 10% w/v PEG8000, 3% w/v PEG6000 |






