Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

6P8D

Vaccine-elicited murine FP-targeting antibody vFP6.01 in complex with HIV fusion peptide (residue 512-519)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2016-11-20
DetectorDECTRIS EIGER X 16M
Wavelength(s)1
Spacegroup nameP 21 21 21
Unit cell lengths42.311, 119.777, 185.503
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution41.252 - 2.102
R-factor0.2724
Rwork0.271
R-free0.30930
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.826
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX ((1.15.2_3472: ???))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.140
High resolution limit [Å]2.1005.7002.100
Rmerge0.0910.0490.481
Rmeas0.1010.0550.535
Rpim0.0420.0240.228
Total number of observations275912
Number of reflections5346629982153
<I/σ(I)>6.4
Completeness [%]95.597.178.5
Redundancy5.254
CC(1/2)0.9960.885
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2932.5M NaCl, 0.2M Li2SO4, 0.1M acetate pH 4.5

222926

PDB entries from 2024-07-24

PDB statisticsPDBj update infoContact PDBjnumon