6P8D
Vaccine-elicited murine FP-targeting antibody vFP6.01 in complex with HIV fusion peptide (residue 512-519)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-11-20 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 42.311, 119.777, 185.503 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.252 - 2.102 |
R-factor | 0.2724 |
Rwork | 0.271 |
R-free | 0.30930 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 0.826 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.15.2_3472: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.140 |
High resolution limit [Å] | 2.100 | 5.700 | 2.100 |
Rmerge | 0.091 | 0.049 | 0.481 |
Rmeas | 0.101 | 0.055 | 0.535 |
Rpim | 0.042 | 0.024 | 0.228 |
Total number of observations | 275912 | ||
Number of reflections | 53466 | 2998 | 2153 |
<I/σ(I)> | 6.4 | ||
Completeness [%] | 95.5 | 97.1 | 78.5 |
Redundancy | 5.2 | 5 | 4 |
CC(1/2) | 0.996 | 0.885 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 2.5M NaCl, 0.2M Li2SO4, 0.1M acetate pH 4.5 |