6P7Z
Co-crystal Structure of human SMYD3 with Isoxazole Amides Inhibitors
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | APS BEAMLINE 21-ID-F |
| Synchrotron site | APS |
| Beamline | 21-ID-F |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2013-10-10 |
| Detector | RAYONIX MX-225 |
| Wavelength(s) | 1.0000 |
| Spacegroup name | P 21 21 21 |
| Unit cell lengths | 61.140, 66.179, 107.330 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 31.621 - 1.190 |
| R-factor | 0.1818 |
| Rwork | 0.181 |
| R-free | 0.19810 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Data reduction software | DENZO |
| Data scaling software | HKL-2000 |
| Phasing software | PHENIX |
| Refinement software | PHENIX ((1.15.2_3472)) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 1.230 |
| High resolution limit [Å] | 1.190 | 2.560 | 1.190 |
| Rmerge | 0.070 | 0.043 | 0.460 |
| Total number of observations | 501496 | ||
| Number of reflections | 138790 | 14217 | 13396 |
| <I/σ(I)> | 9.2 | ||
| Completeness [%] | 99.0 | 97.5 | 96.8 |
| Redundancy | 3.6 | 3.6 | 3.4 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 295 | Sitting drop, room temp, reservoir is 20%PEG 3350, 0.2M MgOAc protein at 5mg/ml ratio to reservoir is 1:1, seed Soaking: 0.1ul of 200mM compound in DMSO added to drop for 72 hours before harvest |






