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6OXC

Structure of Mycobacterium tuberculosis methylmalonyl-CoA mutase with adenosyl cobalamin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-B
Synchrotron siteAPS
Beamline23-ID-B
Temperature [K]100
Detector technologyPIXEL
Collection date2018-06-20
DetectorDECTRIS EIGER X 16M
Wavelength(s)1.0332
Spacegroup nameP 21 21 21
Unit cell lengths77.802, 103.561, 211.197
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution28.967 - 1.900
R-factor0.1639
Rwork0.162
R-free0.20190
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2req
RMSD bond length0.011
RMSD bond angle1.244
Data reduction softwareXDS
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.10.1_2155: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]29.1001.930
High resolution limit [Å]1.9001.900
Rmerge0.1260.887
Rmeas0.1601.104
Number of reflections1296726274
<I/σ(I)>7.91.7
Completeness [%]96.595.4
Redundancy4.14
CC(1/2)0.9930.636
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5293100 mM sodium cacodylate/HCl, pH 6.5, 800 mM sodium citrate tribasic dihydrate, 0.05% w/v casein, 0.05% w/v hemoglobin, 0.0005% w/v pepsin, 0.0005% w/v protease, 0.0005% w/v Proteinase K, 0.0005% w/v trypsin, 0.002 M HEPES sodium, pH 6.8

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