6OXA
Dimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 24-ID-C |
Synchrotron site | APS |
Beamline | 24-ID-C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2013-03-21 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9795 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 212.791, 453.079, 608.934 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 146.585 - 3.250 |
R-factor | 0.2305 |
Rwork | 0.229 |
R-free | 0.25620 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4v5c |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.15.2_3472) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 146.585 | 146.585 | 3.280 |
High resolution limit [Å] | 3.200 | 14.320 | 3.200 |
Rmerge | 0.234 | 0.023 | 1.122 |
Rmeas | 0.279 | 0.027 | 1.428 |
Total number of observations | 2845730 | ||
Number of reflections | 883891 | 10410 | 51547 |
<I/σ(I)> | 5.87 | 35.17 | 0.9 |
Completeness [%] | 92.5 | 91.3 | 73.3 |
Redundancy | 3.22 | 3.337 | 2.261 |
CC(1/2) | 0.989 | 0.999 | 0.297 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 293.15 | 0.1 M Tris-HAc, 0.2M KSCN, PEG 5.1%, 5.1% PEG550MME |