6OTN
Crystal Structure of an N-terminal Fragment of Cancer Associated Tropomyosin 3.1 (Tpm3.1)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 90 |
Detector technology | PIXEL |
Collection date | 2018-08-16 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.979338 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 97.201, 97.201, 93.100 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.560 - 2.400 |
R-factor | 0.238 |
Rwork | 0.235 |
R-free | 0.26580 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1ic2 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.21) |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 29.560 | 29.560 | 2.460 |
High resolution limit [Å] | 2.400 | 10.720 | 2.400 |
Rmerge | 0.084 | 0.039 | 0.791 |
Rmeas | 0.086 | 0.040 | 0.819 |
Rpim | 0.022 | 0.011 | 0.207 |
Total number of observations | 274283 | 3120 | 17237 |
Number of reflections | 17984 | 242 | 1196 |
<I/σ(I)> | 23.2 | 58.6 | 3.4 |
Completeness [%] | 99.3 | 95.3 | 90.9 |
Redundancy | 15.3 | 12.9 | 14.4 |
CC(1/2) | 0.999 | 0.999 | 0.911 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 293 | Crystals were grown in hanging drops by mixing purified N_82AA_Tpm3.1 at 20 mg/ml with an equal volume of reservoir solution (0.1 M BisTris pH 6.5, 0.2 M Li2SO4, 12% polyethylene glycol 3350) |