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6OT7

Bimetallic dodecameric cage design 3 (BMC3) from cytochrome cb562

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.3.1
Synchrotron siteALS
Beamline8.3.1
Temperature [K]100
Detector technologyPIXEL
Collection date2018-12-14
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)1.11583
Spacegroup nameH 3 2
Unit cell lengths126.700, 126.700, 167.800
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution91.830 - 1.850
R-factor0.1836
Rwork0.183
R-free0.21060
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3m4b
RMSD bond length0.008
RMSD bond angle0.867
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]91.83091.8301.900
High resolution limit [Å]1.8508.2701.850
Rmerge0.0960.0372.377
Rmeas0.1010.0392.498
Rpim0.031
Number of reflections857839766342
<I/σ(I)>13.747.511.04
Completeness [%]100.0100100
Redundancy10.3211.24410.553
CC(1/2)0.9990.9990.468
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.5298Protein solution of: 2.2 mM protein with 1.65 mM Fe and 3 mM Zn premixed briefly prior to crystallisation. Drops were 1ul + 1 ul of protein solution and the following mother liquor: 30% PEG400, 0.1 M HEPES pH 7.5, 0.2 M (NH4)2SO4

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PDB entries from 2024-10-16

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