6OT7
Bimetallic dodecameric cage design 3 (BMC3) from cytochrome cb562
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-12-14 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.11583 |
Spacegroup name | H 3 2 |
Unit cell lengths | 126.700, 126.700, 167.800 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 91.830 - 1.850 |
R-factor | 0.1836 |
Rwork | 0.183 |
R-free | 0.21060 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3m4b |
RMSD bond length | 0.008 |
RMSD bond angle | 0.867 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 91.830 | 91.830 | 1.900 |
High resolution limit [Å] | 1.850 | 8.270 | 1.850 |
Rmerge | 0.096 | 0.037 | 2.377 |
Rmeas | 0.101 | 0.039 | 2.498 |
Rpim | 0.031 | ||
Number of reflections | 85783 | 976 | 6342 |
<I/σ(I)> | 13.7 | 47.51 | 1.04 |
Completeness [%] | 100.0 | 100 | 100 |
Redundancy | 10.32 | 11.244 | 10.553 |
CC(1/2) | 0.999 | 0.999 | 0.468 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 298 | Protein solution of: 2.2 mM protein with 1.65 mM Fe and 3 mM Zn premixed briefly prior to crystallisation. Drops were 1ul + 1 ul of protein solution and the following mother liquor: 30% PEG400, 0.1 M HEPES pH 7.5, 0.2 M (NH4)2SO4 |