6OSR
Crystal structure of Influenza hemagglutinin from strain A/Melbourne/1/1946(H1N1)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2019-03-21 |
Detector | RAYONIX MX-225 |
Wavelength(s) | 0.97872 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 73.100, 113.970, 246.380 |
Unit cell angles | 90.00, 91.44, 90.00 |
Refinement procedure
Resolution | 48.736 - 2.550 |
R-factor | 0.1921 |
Rwork | 0.191 |
R-free | 0.24590 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6mya |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX (dev_3409) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 48.736 | 48.736 | 2.620 |
High resolution limit [Å] | 2.550 | 11.400 | 2.550 |
Rmerge | 0.168 | 0.055 | 1.089 |
Rmeas | 0.186 | 0.063 | 1.210 |
Total number of observations | 691488 | ||
Number of reflections | 131565 | 1513 | 9715 |
<I/σ(I)> | 7.78 | 19.52 | 1.52 |
Completeness [%] | 99.8 | 96.9 | 99.7 |
Redundancy | 5.256 | 4.683 | 5.284 |
CC(1/2) | 0.992 | 0.997 | 0.548 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 287 | 0.1 uL 10.1 mg/mL SEC-purified InvbX.18715.a.KN11.PD38349 in 25 mM Tris, pH 8.5, 150 mM sodium chloride + 0.1 uL mother liquor (0.2 M potassium citrate, 20% PEG3350, 3% 1,5-pentanediol), cryoprotection: mother liquor + 20% ethylene glycol, Crystal ID 308017b5, data set yxj7-1 |