6OQI
CDK2 in complex with Cpd14 (5-fluoro-4-(4-methyl-5,6,7,8-tetrahydro-4H-pyrazolo[1,5-a]azepin-3-yl)-N-(5-(4-methylpiperazin-1-yl)pyridin-2-yl)pyrimidin-2-amine)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 5.0.2 |
Synchrotron site | ALS |
Beamline | 5.0.2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-02-28 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.999 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 53.460, 72.090, 71.600 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.941 - 2.000 |
R-factor | 0.1998 |
Rwork | 0.198 |
R-free | 0.24110 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1aqa |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.941 | 42.941 | 1.865 |
High resolution limit [Å] | 1.858 | 8.603 | 1.858 |
Rmerge | 0.120 | 0.031 | 4.245 |
Rmeas | 0.125 | 0.032 | 4.424 |
Rpim | 0.035 | 0.009 | 1.233 |
Total number of observations | 305459 | 3217 | 3048 |
Number of reflections | 23997 | 296 | 240 |
<I/σ(I)> | 13.4 | 44.1 | 0.7 |
Completeness [%] | 100.0 | 99.7 | 99.2 |
Redundancy | 12.7 | 10.9 | 12.7 |
CC(1/2) | 0.999 | 0.999 | 0.350 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 7.5 | 292 | 10-12% PEG 4K, 50 mM Hepes pH7.5, 50 mM Ammonia Acetate |