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6OJT

Crystal structure of Sphingomonas paucimobilis TMY1009 LsdA phenylazophenol complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCLSI BEAMLINE 08ID-1
Synchrotron siteCLSI
Beamline08ID-1
Temperature [K]100
Detector technologyPIXEL
Collection date2015-08-13
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97949
Spacegroup nameP 32 2 1
Unit cell lengths181.909, 181.909, 96.431
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution61.004 - 3.000
R-factor0.2127
Rwork0.211
R-free0.24070
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.002
RMSD bond angle0.590
Data reduction softwareMOSFLM
Data scaling softwareAimless (0.3.5)
Phasing softwarePHASER (2.7.16)
Refinement softwarePHENIX ((1.14_3260: ???))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]90.95090.9503.150
High resolution limit [Å]3.0009.9503.000
Rmerge0.1260.0690.479
Rmeas0.1400.0760.536
Rpim0.0600.0310.236
Number of reflections3430210974572
<I/σ(I)>9.7
Completeness [%]92.799.594.4
Redundancy5.45.85
CC(1/2)0.9860.9960.884
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2930.2 M sodium fluoride, 17% PEG3350 (v/v), 1 mM phenylazophenol in DMF

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