6OFM
Crystal structure of green fluorescent protein (GFP); S65T, Y66(3-CH3Y); ih circular permutant (50-51)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-12-04 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9795 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 50.977, 68.810, 60.608 |
Unit cell angles | 90.00, 101.58, 90.00 |
Refinement procedure
Resolution | 36.264 - 1.480 |
R-factor | 0.1605 |
Rwork | 0.160 |
R-free | 0.17790 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 4zf3 |
RMSD bond length | 0.006 |
RMSD bond angle | 0.886 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.13rc2_2986: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 39.260 | 1.530 |
High resolution limit [Å] | 1.480 | 1.480 |
Rmeas | 0.074 | 1.440 |
Number of reflections | 66961 | 6627 |
<I/σ(I)> | 19.7 | 1.5 |
Completeness [%] | 97.9 | 97.2 |
Redundancy | 13.8 | 13.6 |
CC(1/2) | 1.000 | 0.768 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 295 | 0.15 M ammonium acetate, 28% PEG 3350 |