6OC6
Lanthanide-dependent methanol dehydrogenase XoxF from Methylobacterium extorquens, in complex with Lanthanum and Pyrroloquinoline quinone
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-10-16 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.979 |
Spacegroup name | P 21 21 2 |
Unit cell lengths | 101.272, 101.941, 103.691 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.350 - 2.890 |
R-factor | 0.2062 |
Rwork | 0.204 |
R-free | 0.25810 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6oc5 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.18rc1-3769) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.000 | 40.000 | 3.000 |
High resolution limit [Å] | 2.890 | 6.240 | 2.900 |
Rmerge | 0.303 | 0.110 | 1.020 |
Rmeas | 0.339 | 0.124 | 1.145 |
Rpim | 0.150 | 0.056 | 0.509 |
Number of reflections | 24645 | 2648 | 2388 |
<I/σ(I)> | 2.9 | ||
Completeness [%] | 99.8 | 100 | 98.7 |
Redundancy | 4.8 | 4.6 | 4.7 |
CC(1/2) | 0.990 | 0.525 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 294.15 | 0.2M Ammonium chloride, 20% PEG 3350 |