Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6OBD

Crystal structure of anti-GLD52 Fab complex with human GLD52 peptide mimetic

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsCu FINE FOCUS
Temperature [K]100
Detector technologyCCD
Collection date2010-08-04
DetectorRIGAKU SATURN 944
Wavelength(s)1.5419
Spacegroup nameP 21 21 21
Unit cell lengths54.400, 131.200, 133.800
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.530 - 2.200
R-factor0.2372
Rwork0.234
R-free0.30680
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.019
RMSD bond angle1.848
Data reduction softwareHKL-2000
Data scaling softwared*TREK
Phasing softwareBALBES
Refinement softwareREFMAC (5.5.0109)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]30.53030.5302.280
High resolution limit [Å]2.2004.7302.200
Rmerge0.0540.0390.216
Rmeas0.0630.0450.293
Total number of observations149992
Number of reflections4750951934167
<I/σ(I)>12.923.62.8
Completeness [%]95.999.384.9
Redundancy3.133.871.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1EVAPORATION5.82940.05M zinc acetate, 17% PEG3350, 0.1M MES pH 5.8

239149

PDB entries from 2025-07-23

PDB statisticsPDBj update infoContact PDBjnumon