6OAH
Crystal structure of human FPPS in complex with an allosteric inhibitor YF-02-78
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-02-15 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 0.97949 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 111.330, 111.330, 70.000 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 78.720 - 2.200 |
R-factor | 0.21046 |
Rwork | 0.208 |
R-free | 0.26041 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 4h5c |
RMSD bond length | 0.012 |
RMSD bond angle | 1.667 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | REFMAC (5.8.0238) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 78.720 | 2.240 |
High resolution limit [Å] | 2.200 | 2.200 |
Rmerge | 0.066 | 1.650 |
Rmeas | 0.069 | 1.718 |
Rpim | 0.019 | 0.475 |
Number of reflections | 22715 | 1091 |
<I/σ(I)> | 19.6 | 1.7 |
Completeness [%] | 99.5 | 98.6 |
Redundancy | 12.9 | 12.8 |
CC(1/2) | 1.000 | 0.480 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 295 | 0.075 M HEPES, 0.6 M potassium phosphate, 0.6 M sodium phosphate, 25% glycerol |