6O8N
Crystal Structure of C9S tetrasulfide state of Sulfide-responsive transcriptional repressor (SqrR) from Rhodobacter capsulatus.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2017-09-05 |
Detector | RDI CMOS_8M |
Wavelength(s) | 1.000031 |
Spacegroup name | P 4 21 2 |
Unit cell lengths | 84.837, 84.837, 57.257 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.459 - 1.950 |
R-factor | 0.2102 |
Rwork | 0.208 |
R-free | 0.24650 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3pqk |
RMSD bond length | 0.001 |
RMSD bond angle | 0.436 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 59.990 | 2.020 |
High resolution limit [Å] | 1.950 | 1.950 |
Rmeas | 0.174 | |
Rpim | 0.047 | 0.340 |
Number of reflections | 15799 | 2594 |
<I/σ(I)> | 14.7 | 2.3 |
Completeness [%] | 100.0 | 100 |
Redundancy | 13.6 | 13 |
CC(1/2) | 0.998 | 0.790 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | Ammonium sulfate 0.2M, Na Calcodyate 0.1M pH 6.5, 30% PEG 8000, Protein buffer: 20 mM Tris pH 8, 200 mM NaCl, 2mM EDTA, SqrR 6 mg/ml |