6O7O
Nitrogenase MoFeP mutant F99Y/S188A from Azotobacter vinelandii in the dithionite reduced state after redox cycling
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-04-13 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 1.5498 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 76.746, 128.678, 107.536 |
Unit cell angles | 90.00, 108.94, 90.00 |
Refinement procedure
Resolution | 39.462 - 1.890 |
R-factor | 0.1523 |
Rwork | 0.149 |
R-free | 0.18590 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2min |
RMSD bond length | 0.010 |
RMSD bond angle | 1.175 |
Data reduction software | iMOSFLM |
Data scaling software | Aimless |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 79.800 | 1.920 |
High resolution limit [Å] | 1.890 | 1.890 |
Rmerge | 0.141 | 0.867 |
Rmeas | 0.169 | 1.051 |
Rpim | 0.092 | 0.582 |
Number of reflections | 147935 | 7300 |
<I/σ(I)> | 8 | 1.8 |
Completeness [%] | 94.0 | 93.5 |
Redundancy | 6.3 | 6.1 |
CC(1/2) | 0.987 | 0.695 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8.5 | 293 | 18% PEG 8000, 100 mM Tris pH 8.5, 500 mM NaCl, 10 mM dithionite. Protein was redox cycled with 5 mM indigo carmine and 10 mM dithionite prior to crystallization. |