6O4A
CRYSTAL STRUCTURE OF SMT FUSION PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FROM BURKHOLDERIA PSEUDOMALLEI COMPLEXED WITH SF355
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-06-03 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.979490 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 62.820, 32.650, 178.190 |
Unit cell angles | 90.00, 90.01, 90.00 |
Refinement procedure
Resolution | 44.550 - 2.100 |
R-factor | 0.159 |
Rwork | 0.157 |
R-free | 0.20800 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | BE4 model 2 domains |
RMSD bond length | 0.007 |
RMSD bond angle | 0.925 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX ((1.12RC0_2798: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.550 | 2.150 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.051 | 0.189 |
Rmeas | 0.062 | 0.025 |
Total number of observations | 136959 | |
Number of reflections | 42810 | 555 |
<I/σ(I)> | 16.63 | 5 |
Completeness [%] | 98.8 | 93.2 |
Redundancy | 3.2 | 2.5 |
CC(1/2) | 0.998 | 0.999 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 289 | BupsA.00130.a.D21 (CID4597, SMT tag on, Batch 1264062) at 10.37mg/ml (in 25mM Tris, pH8.0, 200mM NaCl, 1% glycerol, 1mM TCEP buffer) was incubated with 2mM SF355 (BSI5667). Crystals were produced by sitting drop vapor diffusion with an equal volume combination of the protein/ligand complex and a solution containing HamptonResearch PACT screen (B4): 25% PEG 1500, 100m MIB pH 7.0. The sample was cryoprotected with 15% ethylene glycol: Crystal tray ID 290655b4, puck ID PWP0-3 |