6NYK
Crystal structure of computationally designed protein XAX_GGDQ
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-05-25 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.1111 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 95.416, 55.002, 57.906 |
Unit cell angles | 90.00, 123.38, 90.00 |
Refinement procedure
Resolution | 48.350 - 2.800 |
R-factor | 0.2656 |
Rwork | 0.262 |
R-free | 0.29710 |
Structure solution method | MOLECULAR REPLACEMENT |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (dev_3112) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.350 | 2.590 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.095 | 4.228 |
Rmeas | 0.039 | 4.600 |
Rpim | 0.103 | |
Number of reflections | 8627 | 821 |
<I/σ(I)> | 6.7 | 0.4 |
Completeness [%] | 98.2 | 97.16 |
Redundancy | 6.7 | |
CC(1/2) | 0.187 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 291.15 | 1.0 M lithium chloride, 0.1 M MES pH 6.0, 20% (w/v) PEG 6000 |