6NYI
Crystal structure of computationally designed protein XXA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.3.1 |
Synchrotron site | ALS |
Beamline | 8.3.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-03-03 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.1111 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 129.403, 51.213, 48.838 |
Unit cell angles | 90.00, 102.45, 90.00 |
Refinement procedure
Resolution | 63.181 - 2.300 |
R-factor | 0.2611 |
Rwork | 0.259 |
R-free | 0.28100 |
Structure solution method | MOLECULAR REPLACEMENT |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | PHENIX (dev_3026) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 63.181 | 2.250 |
High resolution limit [Å] | 2.170 | 2.170 |
Rmerge | 0.155 | 2.228 |
Rmeas | 0.169 | 2.439 |
Rpim | 0.065 | 0.973 |
Number of reflections | 16412 | 1457 |
<I/σ(I)> | 7.8 | |
Completeness [%] | 98.7 | 88.52 |
Redundancy | 6.6 | |
CC(1/2) | 0.526 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291.15 | 0.16 M magnesium acetate, 0.08 M sodium cacodylate pH 6.5, 20% (v/v) glycerol |