6NXR
Crystal structure of Arabidopsis thaliana cytosolic triosephosphate isomerase C13D mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-G |
Synchrotron site | APS |
Beamline | 21-ID-G |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-06-26 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.9786 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 38.682, 163.850, 98.093 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 41.000 - 1.300 |
R-factor | 0.1318 |
Rwork | 0.131 |
R-free | 0.15380 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.010 |
RMSD bond angle | 1.591 |
Data reduction software | xia2 |
Data scaling software | Aimless (0.7.3) |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.080 | 1.320 |
High resolution limit [Å] | 1.300 | 1.300 |
Rmerge | 0.069 | 0.435 |
Rmeas | 0.076 | 0.480 |
Rpim | 0.032 | 0.200 |
Number of reflections | 76329 | 3682 |
<I/σ(I)> | 12 | |
Completeness [%] | 99.1 | 97.8 |
Redundancy | 5.5 | 5.5 |
CC(1/2) | 0.996 | 0.921 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 292 | 0.2 M Sodium acetate trihydrate 0.1M TRIS hydrochloride 8.5 30% w/v Polyethylene glycol 4,000 |