6NX9
ECAII(D90T,K162T) MUTANT IN COMPLEX WITH CITRATE AT PH 7
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 HF |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-04-12 |
Detector | DECTRIS EIGER R 4M |
Wavelength(s) | 1.5418 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 152.009, 62.539, 143.239 |
Unit cell angles | 90.00, 118.19, 90.00 |
Refinement procedure
Resolution | 26.550 - 1.970 |
R-factor | 0.1617 |
Rwork | 0.160 |
R-free | 0.22570 |
Structure solution method | FOURIER SYNTHESIS |
RMSD bond length | 0.020 |
RMSD bond angle | 2.290 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | REFMAC |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.000 | 40.000 | 2.000 |
High resolution limit [Å] | 1.970 | 5.340 | 1.970 |
Rmerge | 0.095 | 0.028 | 0.511 |
Rmeas | 0.113 | 0.033 | 0.631 |
Rpim | 0.061 | 0.018 | 0.365 |
Total number of observations | 263837 | ||
Number of reflections | 81136 | 4298 | 3900 |
<I/σ(I)> | 7.1 | ||
Completeness [%] | 96.6 | 98.3 | 92.1 |
Redundancy | 3.3 | 3.3 | 2.6 |
CC(1/2) | 0.997 | 0.674 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 293 | Protein, at the concentration 15 mg/ml in 50 mM HEPES buffer pH 7 and 150 mM sodium chloride was mixed with equivolume solution of precipitant that contained, 17% (w/v) PEG3350 and 0.17 M ammonium citrate pH 7. Resulting droplets were equilibrated against the precipitant. Before data collection, crystal was transferred the precipitant containing L-Asn at concentration 20 mM. Subsequently, for the data collection, crystal was briefly transferred to cryo-protecting solution, which had the same composition as precipitant (with L-Asn), except concentration of PEG3350 was increased to 35 % (v/w/) and 10% (v/v), and also contained 15% of glycerol |