6NWD
X-ray Crystallographic structure of Gloeobacter rhodopsin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-03-11 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1.0332 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 54.250, 129.250, 82.650 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 42.790 - 2.000 |
Rwork | 0.230 |
R-free | 0.24440 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3ddl |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | BALBES |
Refinement software | PHENIX ((1.15.2_3472)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 42.790 | 2.072 |
High resolution limit [Å] | 2.000 | 2.000 |
Rmerge | 0.044 | 0.215 |
Rmeas | 0.063 | 0.305 |
Rpim | 0.044 | 0.215 |
Number of reflections | 19500 | 19313 |
<I/σ(I)> | 6.6 | |
Completeness [%] | 96.4 | |
Redundancy | 1.8 | |
CC(1/2) | 0.997 | 0.891 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 3.4 | 307 | 2.6-2.8 M NaH2PO4, 1,6-hexanediol, triethylene glycol, zinc acetate, n-Octyl-beta-D-Glucoside |