6NRQ
Crystal structure of Dpr10 IG1 bound to DIP-alpha IG1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-B |
Synchrotron site | APS |
Beamline | 23-ID-B |
Temperature [K] | 120 |
Detector technology | PIXEL |
Collection date | 2018-02-06 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.0332 |
Spacegroup name | P 1 |
Unit cell lengths | 51.011, 53.551, 56.685 |
Unit cell angles | 119.68, 103.77, 92.88 |
Refinement procedure
Resolution | 48.551 - 1.800 |
R-factor | 0.1759 |
Rwork | 0.174 |
R-free | 0.20540 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5eo9 |
RMSD bond length | 0.008 |
RMSD bond angle | 0.938 |
Data reduction software | XDS (Nov 11, 2017) |
Data scaling software | XDS (Nov 11, 2017) |
Phasing software | PHASER (2.8.1) |
Refinement software | PHENIX (dev_3112) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.910 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.033 | 0.515 |
Rmeas | 0.046 | 0.721 |
Number of reflections | 40135 | 4014 |
<I/σ(I)> | 11.77 | 1.31 |
Completeness [%] | 86.8 | 53.8 |
Redundancy | 1.82 | 1.67 |
CC(1/2) | 0.999 | 0.670 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 294 | 1 M lithium chloride, 0.1 M HEPES, pH 7.0, 20% (w/v) PEG 6000 |