6NQH
Xanthomonas citri Dephospho-PGM in complex with xylose-1-phosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2016-11-03 |
Detector | RDI CMOS_8M |
Wavelength(s) | 1.00003 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 43.863, 54.626, 173.359 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 39.697 - 1.450 |
R-factor | 0.1792 |
Rwork | 0.177 |
R-free | 0.21470 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5bmn |
RMSD bond length | 0.006 |
RMSD bond angle | 0.856 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 57.790 | 1.470 |
High resolution limit [Å] | 1.450 | 1.450 |
Rmerge | 0.061 | 0.642 |
Rmeas | 0.067 | 0.762 |
Rpim | 0.026 | 0.398 |
Number of reflections | 54627 | 2590 |
<I/σ(I)> | 18.2 | 1.6 |
Completeness [%] | 72.8 | 70.5 |
Redundancy | 5.9 | 3.3 |
CC(1/2) | 0.999 | 0.564 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 292 | 22% PEG 8000, 0.2M MgCl, 0.1M HEPES |