6NP9
PD-L1 IgV domain V76T with fragment
Experimental procedure
実験手法 | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-08-16 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 1 |
Spacegroup name | C 2 2 21 |
格子定数 [Å] | 53.331, 54.111, 85.724 |
格子定数 [度] | 90.00, 90.00, 90.00 |
精密化法
残基 | 28.427 - 1.270 |
R因子 | 0.204 |
Rwork | 0.202 |
R-free | 0.21830 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3bik |
結合長の平均二乗偏差(RMSD) [Å] | 0.006 |
結合角の平均二乗偏差(RMSD) [度] | 0.895 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.14_3260: ???)) |
Quality characteristics
Overall | Outer shell | |
分解能 [Å] (低) | 40.000 | 1.290 |
分解能 [Å] (高) | 1.270 | 1.270 |
Rmerge_l_obs | 0.055 | 0.288 |
Rpim | 0.018 | 0.112 |
独立反射数 | 32928 | 1604 |
<I/σ(I)> | 61 | 7.1 |
完全性 [%] | 99.6 | 99.8 |
冗長性 | 9.2 | 7.1 |
CC(1/2) | 0.937 |
結晶化条件
結晶ID | 方法 | pH | 温度 | 溶液条件 |
1 | EVAPORATION | 291 | Ammonium Sulfate |