6NP2
AAC-VIa bound to Sisomicin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-03-13 |
Detector | DECTRIS PILATUS3 S 6M |
Wavelength(s) | 1 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 87.304, 86.007, 50.164 |
Unit cell angles | 90.00, 119.74, 90.00 |
Refinement procedure
Resolution | 43.201 - 1.200 |
R-factor | 0.13 |
Rwork | 0.130 |
R-free | 0.13650 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6bc6 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.230 |
High resolution limit [Å] | 1.200 | 2.960 | 1.200 |
Rmerge | 0.067 | 0.065 | 0.473 |
Rmeas | 0.081 | 0.080 | 0.584 |
Rpim | 0.046 | 0.045 | 0.337 |
Total number of observations | 292932 | ||
Number of reflections | 97575 | 6289 | 6421 |
<I/σ(I)> | 8.9 | ||
Completeness [%] | 97.5 | 92.8 | 96 |
Redundancy | 3 | 3 | 2.7 |
CC(1/2) | 0.985 | 0.795 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 279 | 15-20% polyethylene glycol (PEG) 8000,0.1 M Tris, pH=8.5 and 0.3 M MgCl2. |