6NOL
Xanthomonas citri Dephospho-PGM in complex with mannose-1-phosphate
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 4.2.2 |
Synchrotron site | ALS |
Beamline | 4.2.2 |
Temperature [K] | 100 |
Detector technology | CMOS |
Collection date | 2018-01-31 |
Detector | RDI CMOS_8M |
Wavelength(s) | 1.00003 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 43.680, 54.720, 173.240 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.262 - 1.730 |
R-factor | 0.1931 |
Rwork | 0.191 |
R-free | 0.24880 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5bmn |
RMSD bond length | 0.007 |
RMSD bond angle | 0.878 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.11.1_2575) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 46.262 | 1.760 |
High resolution limit [Å] | 1.730 | 1.730 |
Rmerge | 0.358 | 2.696 |
Rmeas | 0.373 | 2.850 |
Rpim | 0.103 | 0.894 |
Number of reflections | 44430 | 2414 |
<I/σ(I)> | 12.7 | 0.7 |
Completeness [%] | 99.9 | 99.9 |
Redundancy | 11.7 | 9.1 |
CC(1/2) | 0.996 | 0.352 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 292 | 22% PEG 8000, 0.2M MgCl, 0.1M HEPES |