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6NMM

Ternary complex structure of the T130K mutant of ANT-4 with Neomycin, AMPCPP and Pyrophosphate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2017-03-10
DetectorDECTRIS PILATUS3 S 6M
Wavelength(s)1.0332
Spacegroup nameP 1 21 1
Unit cell lengths85.510, 59.250, 102.040
Unit cell angles90.00, 94.80, 90.00
Refinement procedure
Resolution38.580 - 2.500
R-factor0.1764
Rwork0.174
R-free0.23000
RMSD bond length0.003
RMSD bond angle0.651
Data reduction softwareMOSFLM
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwarePHENIX ((1.13_2998: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]38.5802.600
High resolution limit [Å]2.5002.500
Rmerge0.0770.224
Rmeas0.0890.267
Rpim0.0430.141
Number of reflections308313276
<I/σ(I)>12.25.1
Completeness [%]86.681.9
Redundancy3.83.2
CC(1/2)0.9330.933
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP285crystallized in 9-10% PEG 5K MME, 0.1 M Tris pH 7.5-8.0, 0.1-0.2 M CaCl2. The crystals were transferred to a cryosolution containing 9-10% PEG 5K MME, 0.1 M Tris pH 7.5-8.0, 10 mM MgCl2 and 30% glycerol for varying time intervals (3-30 min)

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PDB entries from 2024-05-15

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