6NLZ
Crystal structure of Mycobacterium tuberculosis dethiobiotin synthetase in complex with fragment degradation product B9D
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | AUSTRALIAN SYNCHROTRON BEAMLINE MX1 |
Synchrotron site | Australian Synchrotron |
Beamline | MX1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-06-20 |
Detector | ADSC QUANTUM 210r |
Wavelength(s) | 0.9537 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 54.610, 105.720, 154.530 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 46.306 - 1.900 |
R-factor | 0.2331 |
Rwork | 0.231 |
R-free | 0.27330 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 0.967 |
Data reduction software | XDS |
Data scaling software | Aimless (0.5.27) |
Phasing software | PHASER (2.6.1) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 62.380 | 62.380 | 1.940 |
High resolution limit [Å] | 1.900 | 9.110 | 1.900 |
Rmerge | 0.115 | 0.033 | 1.816 |
Rmeas | 0.119 | 0.034 | 1.889 |
Rpim | 0.033 | 0.010 | 0.517 |
Number of reflections | 71473 | 756 | 4544 |
<I/σ(I)> | 14.7 | ||
Completeness [%] | 100.0 | 99.6 | 100 |
Redundancy | 13 | 12 | 13.2 |
CC(1/2) | 0.999 | 1.000 | 0.811 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 289.15 | 1.2 - 1.7 M ammonium sulfate, 0.1 M Tris pH 8, 10-15% glycerol |