6NLY
Fragment of human mitochondrial Alanyl-tRNA Synthetase C-Ala domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL12-2 |
Synchrotron site | SSRL |
Beamline | BL12-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-01-24 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97938 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 103.220, 317.230, 54.710 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 38.019 - 2.307 |
R-factor | 0.2118 |
Rwork | 0.209 |
R-free | 0.25700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6nlq |
RMSD bond length | 0.011 |
RMSD bond angle | 1.415 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER (2.7.17) |
Refinement software | PHENIX |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 38.019 | 38.019 | 2.370 |
High resolution limit [Å] | 2.310 | 10.320 | 2.310 |
Rmerge | 0.045 | 0.019 | 0.732 |
Rmeas | 0.049 | 0.021 | 0.785 |
Total number of observations | 291673 | ||
Number of reflections | 40004 | 518 | 2885 |
<I/σ(I)> | 23.99 | 66.53 | 3.57 |
Completeness [%] | 99.3 | 96.5 | 98.3 |
Redundancy | 7.291 | 6.608 | 7.493 |
CC(1/2) | 1.000 | 1.000 | 0.944 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | EVAPORATION | 8.5 | 298 | 0.1 M Tris-HCl, 40% PEG200 |