6NLX

Crystal Structure of Glyceraldehyde-3-phosphate Dehydrogenase from Naegleria fowleri with bound NAD

Experimental procedure

Experimental method	SINGLE WAVELENGTH
Source type	SYNCHROTRON
Source details	APS BEAMLINE 21-ID-F
Synchrotron site	APS
Beamline	21-ID-F
Temperature [K]	100
Detector technology	CCD
Collection date	2017-08-18
Detector	RAYONIX MX-300
Wavelength(s)	0.97872
Spacegroup name	P 21 21 21
Unit cell lengths	73.010, 119.940, 162.900
Unit cell angles	90.00, 90.00, 90.00

Refinement procedure

Resolution	49.467 - 1.800
R-factor	0.1691
Rwork	0.169
R-free	0.20390
Structure solution method	MOLECULAR REPLACEMENT
Starting model (for MR)	1u8f
Data reduction software	XDS
Data scaling software	XSCALE
Phasing software	MoRDa
Refinement software	PHENIX

Data quality characteristics

	Overall	Inner shell	Outer shell
Low resolution limit [Å]	49.467	49.467	1.850
High resolution limit [Å]	1.800	8.050	1.800
Rmerge	0.076	0.026	0.548
Rmeas	0.084	0.029	0.600
Total number of observations	760791
Number of reflections	129448	1508	9616
<I/σ(I)>	13.9	31.9	2.88
Completeness [%]	97.4	91.2	98.6
Redundancy	5.877	5.904	6.268
CC(1/2)	0.998	0.999	0.835

Crystallization Conditions

crystal ID	method	pH	temperature	details
1	VAPOR DIFFUSION, SITTING DROP	6.5	290	MCSG1 F2 (293453f2): 200mM Ammonium Acetate, 100mM Bis-Tris:HCl pH 6.5, 25% (w/v) PEG 3350: NafoA.00855.a.B1.PS38303 @ 21.4mg/mL: 15%EG: zzl0-7: aps_20170818_21idf