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6NKT

Ternary complex crystal structure of K289M variant of DNA polymerase Beta with beta-gamma difluoro analogue of dGTP

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007
Temperature [K]100
Detector technologyCCD
Collection date2016-07-25
DetectorRIGAKU SATURN 944
Wavelength(s)1.5418
Spacegroup nameP 1 21 1
Unit cell lengths55.330, 79.669, 54.673
Unit cell angles90.00, 106.36, 90.00
Refinement procedure
Resolution31.862 - 2.600
R-factor0.2093
Rwork0.199
R-free0.30270
RMSD bond length0.011
RMSD bond angle1.317
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0002.640
High resolution limit [Å]2.6007.0502.600
Rmerge0.0920.0400.792
Total number of observations52986
Number of reflections14381747704
<I/σ(I)>8.2
Completeness [%]99.799.197.4
Redundancy3.73.63.3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.529116-18% PEG 3350, 50 mM Imidazole, 350 mM Sodium Acetate

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