6NKC
Crystal Structure of the Lipase Lip_vut1 from Goat Rumen metagenome.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-12-03 |
Detector | DECTRIS PILATUS3 X 6M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 43 |
Unit cell lengths | 49.870, 49.870, 141.625 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.263 - 1.631 |
R-factor | 0.1587 |
Rwork | 0.157 |
R-free | 0.18850 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1t2n |
RMSD bond length | 0.010 |
RMSD bond angle | 1.018 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | HKL-3000 |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.660 |
High resolution limit [Å] | 1.630 | 1.630 |
Rmerge | 0.172 | 0.819 |
Number of reflections | 42897 | 2156 |
<I/σ(I)> | 16.9 | 1.67 |
Completeness [%] | 100.0 | 99.9 |
Redundancy | 6.5 | 5 |
CC(1/2) | 0.732 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 289 | 1 % Tryptone, 0.05 M HEPES sodium pH 7.0, 12% w/v Polyethylene glycol 3,350, 0.001 M Sodium azide |