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6NJY

Type IV CRISPR associated RNA endonuclease Cas6 - apo form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL12-2
Synchrotron siteSSRL
BeamlineBL12-2
Temperature [K]193
Detector technologyPIXEL
Collection date2018-02-07
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.55, 1.0718
Spacegroup nameP 61
Unit cell lengths85.541, 85.541, 142.587
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution40.004 - 1.760
R-factor0.1682
Rwork0.167
R-free0.19780
Structure solution methodSAD
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareSOLVE
Refinement softwarePHENIX (1.13_2998)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]40.00440.0001.820
High resolution limit [Å]1.7603.7901.760
Rmerge0.0530.0400.727
Rmeas0.0580.0440.822
Rpim0.0230.0170.376
Number of reflections5814959225618
<I/σ(I)>18.1
Completeness [%]99.699.996.3
Redundancy66.64.2
CC(1/2)0.9960.736
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5293Mother Liquor = 0.1 M sodium acetate trihydrate (pH 5.0) and 1.75M ammonium sulfate. 6-8 mg/ml of protein purified in 100 mM HEPES pH 7.5, 150 mM KCl, 5% glycerol, 1mM TCEP, was mixed in equal volumes (2 microliters of each) on a sitting drop pedestal with ~500 mL of mother liquor in reservoir.

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