6NIM
Trypanosoma cruzi - BDF2, TcCLB.506553.20, solved with bromosporine
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU FR-E SUPERBRIGHT |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-11-22 |
Detector | RIGAKU SATURN A200 |
Wavelength(s) | 1.5418 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 68.999, 65.784, 60.107 |
Unit cell angles | 90.00, 110.64, 90.00 |
Refinement procedure
Resolution | 21.710 - 1.780 |
R-factor | 0.1717 |
Rwork | 0.170 |
R-free | 0.20440 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5czg |
RMSD bond length | 0.009 |
RMSD bond angle | 1.509 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER (2.8.2) |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 1.810 |
High resolution limit [Å] | 1.780 | 4.830 | 1.780 |
Rmerge | 0.053 | 0.037 | 0.453 |
Rmeas | 0.061 | 0.043 | 0.539 |
Rpim | 0.030 | 0.022 | 0.286 |
Total number of observations | 91630 | ||
Number of reflections | 23959 | 1247 | 1012 |
<I/σ(I)> | 11.3 | ||
Completeness [%] | 98.9 | 98.7 | 85.6 |
Redundancy | 3.8 | 3.8 | 2.9 |
CC(1/2) | 0.998 | 0.820 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 293 | 2.0 M NH4SO4 and 0.1M bis Tris pH5.5 |