6NI1
Crystal Structure of the Beta Lactamase Class A penP from Bacillus subtilis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-11-09 |
Detector | DECTRIS PILATUS3 X 6M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 65 |
Unit cell lengths | 87.849, 87.849, 149.853 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 43.924 - 1.900 |
R-factor | 0.1575 |
Rwork | 0.156 |
R-free | 0.19080 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | PDBID 3QHY |
RMSD bond length | 0.009 |
RMSD bond angle | 0.926 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | HKL-3000 |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.930 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.155 | 0.967 |
Number of reflections | 51645 | 2555 |
<I/σ(I)> | 23 | 2.67 |
Completeness [%] | 99.9 | 99.5 |
Redundancy | 13.2 | 12.4 |
CC(1/2) | 0.825 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.8 | 289 | 0.1 M magnesium formate 15 %(w/v) PEG3350 |