6N2S
Ternary complex crystal structure of DNA polymerase Beta with 5-carboxy-dC (5-caC) at the templating position
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | ROTATING ANODE |
| Source details | RIGAKU MICROMAX-007 HF |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2017-09-06 |
| Detector | RIGAKU SATURN 944 |
| Wavelength(s) | 1.5418 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 49.066, 79.631, 55.427 |
| Unit cell angles | 90.00, 106.46, 90.00 |
Refinement procedure
| Resolution | 25.222 - 2.457 |
| R-factor | 0.2112 |
| Rwork | 0.202 |
| R-free | 0.28960 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 2fms |
| RMSD bond length | 0.009 |
| RMSD bond angle | 1.117 |
| Data reduction software | HKL-2000 |
| Data scaling software | HKL-2000 |
| Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
| Overall | Inner shell | Outer shell | |
| Low resolution limit [Å] | 50.000 | 50.000 | 2.490 |
| High resolution limit [Å] | 2.450 | 6.650 | 2.450 |
| Rmerge | 0.093 | 0.049 | 0.472 |
| Rmeas | 0.112 | 0.058 | 0.596 |
| Rpim | 0.061 | 0.032 | 0.358 |
| Total number of observations | 46211 | ||
| Number of reflections | 14763 | 762 | 641 |
| <I/σ(I)> | 11 | ||
| Completeness [%] | 98.6 | 97.2 | 86.9 |
| Redundancy | 3.1 | 3.2 | 2.2 |
| CC(1/2) | 0.996 | 0.813 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 291 | 16-18% PEG 2000 Monomethyl Ether |






