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6N1M

Crystal structure of Fumarate hydratase class II from Legionella pneumophila Philadelphia 1

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU FR-E+ SUPERBRIGHT
Temperature [K]100
Detector technologyCCD
Collection date2018-10-30
DetectorRIGAKU SATURN 944+
Wavelength(s)1.5418
Spacegroup nameI 2 2 2
Unit cell lengths58.230, 122.080, 128.690
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution44.284 - 1.550
R-factor0.144
Rwork0.143
R-free0.16490
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3tv2 as per MORDA
RMSD bond length0.009
RMSD bond angle0.980
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMoRDa
Refinement softwarePHENIX ((dev_3304))
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]44.28444.2841.590
High resolution limit [Å]1.5506.9301.550
Rmerge0.0330.0170.368
Rmeas0.0360.0180.444
Total number of observations499400
Number of reflections662838444373
<I/σ(I)>32.36110.823.17
Completeness [%]99.299.489.5
Redundancy7.53412.8973.033
CC(1/2)1.0001.0000.840
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5285Micolytic MCSG1 screen, D1: 200mM Ammonium sulfate, 25% PEG 3350, 100mM BisTris/HCl pH 6.5: LepnA.01128.a.B1.PS38406 at 17.9mg/ml: cryo: 20% EG: tray 299629d1: puck idj7-6.a

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PDB entries from 2024-07-17

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