6MYL
The Prp8 intein-cisplatin complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL14-1 |
Synchrotron site | SSRL |
Beamline | BL14-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2016-04-29 |
Detector | MARMOSAIC 325 mm CCD |
Wavelength(s) | 1.07147 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 74.853, 74.853, 191.886 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 35.545 - 3.060 |
R-factor | 0.2481 |
Rwork | 0.243 |
R-free | 0.29750 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 6mwy |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHENIX |
Refinement software | PHENIX (1.14_3260) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 100.000 | 35.500 | 3.120 |
High resolution limit [Å] | 3.050 | 7.520 | 3.050 |
Rmerge | 0.101 | 0.075 | 0.954 |
Rmeas | 0.110 | 0.081 | 1.048 |
Rpim | 0.043 | 0.031 | 0.425 |
Number of reflections | 18509 | 765 | 602 |
<I/σ(I)> | 14.1 | ||
Completeness [%] | 97.2 | 95.3 | 93.8 |
Redundancy | 5.8 | 6.1 | 5.6 |
CC(1/2) | 0.997 | 0.702 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 298 | 1.5 M SODIUM CITRATE, 0.1M HEPES, PH 7.5, 10 MM DTT, 2% ISOPROPANOL |