Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

6MYC

Room-temperature structure of deuterated Tetdron (isomorph 2)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU MICROMAX-007
Temperature [K]300
Detector technologyIMAGE PLATE
Collection date2018-03-20
DetectorRIGAKU RAXIS IV++
Wavelength(s)1.54
Spacegroup nameP 1 21 1
Unit cell lengths72.988, 138.075, 115.804
Unit cell angles90.00, 104.49, 90.00
Refinement procedure
Resolution37.373 - 2.396
R-factor0.1556
Rwork0.153
R-free0.21080
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.008
RMSD bond angle1.083
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHENIX
Refinement softwarePHENIX ((1.10.1_2155: ???))
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0002.480
High resolution limit [Å]2.3902.390
Rmerge0.0490.630
Number of reflections1034583182
<I/σ(I)>42.6
Completeness [%]89.590.7
Redundancy2.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP291.1550 mM Tris pH 7.5, 0.15 M NaOAc, and 24% w/v polyethylene glycol 4,000

237735

PDB entries from 2025-06-18

PDB statisticsPDBj update infoContact PDBjnumon