6MX6
The Prp8 intein of Cryptococcus neoformans
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2016-12-14 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97946 |
Spacegroup name | P 1 |
Unit cell lengths | 63.153, 63.226, 80.204 |
Unit cell angles | 103.32, 95.53, 117.34 |
Refinement procedure
Resolution | 32.692 - 1.749 |
R-factor | 0.1982 |
Rwork | 0.197 |
R-free | 0.23470 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6mwy |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.7.16) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 100.000 | 100.000 | 1.780 |
High resolution limit [Å] | 1.750 | 4.750 | 1.750 |
Rmerge | 0.070 | 0.030 | 0.975 |
Rmeas | 0.089 | 0.040 | 1.251 |
Rpim | 0.055 | 0.025 | 0.775 |
Total number of observations | 212046 | ||
Number of reflections | 90650 | 4659 | 4403 |
<I/σ(I)> | 10.6 | ||
Completeness [%] | 86.3 | 88.6 | 84 |
Redundancy | 2.3 | 2.2 | 2.3 |
CC(1/2) | 0.997 | 0.467 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.2 | 298 | 28% PEG4,000, 0.1 M sodium acetate, pH 4.2, 0.2 M ammonium acetate |