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6MW4

Structure of pseudoprotease CspC from Clostridioides difficile

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Temperature [K]100
Detector technologyPIXEL
Collection date2017-03-04
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.033
Spacegroup nameC 2 2 21
Unit cell lengths88.651, 155.176, 91.675
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution45.837 - 1.550
R-factor0.166
Rwork0.164
R-free0.18640
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4i0w
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER (2.5.6)
Refinement softwarePHENIX
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.610
High resolution limit [Å]1.5503.3401.550
Rmerge0.0560.0310.595
Rmeas0.0670.0370.716
Rpim0.0350.0190.394
Total number of observations595469
Number of reflections1772951781217407
<I/σ(I)>5.4
Completeness [%]99.699.997.7
Redundancy3.43.53.1
CC(1/2)0.9980.749
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.52940.2M MES pH 6.5 with 2.5 M ammonium chloride and 0.5 M guanidinium hydrochloride mixed equal volume with 22 mg/ml protein and equilibrated over 2M sodium chloride

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