6MUK
1.93 Angstrom Resolution Crystal Structure of Peptidase M23 from Neisseria gonorrhoeae.
Replaces: 6MOCExperimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-F |
Synchrotron site | APS |
Beamline | 21-ID-F |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2018-08-16 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97872 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 66.964, 66.964, 181.584 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.950 - 1.930 |
R-factor | 0.19079 |
Rwork | 0.188 |
R-free | 0.23554 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3slu |
RMSD bond length | 0.008 |
RMSD bond angle | 1.388 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 1.960 |
High resolution limit [Å] | 1.930 | 1.930 |
Rmerge | 0.049 | 0.841 |
Rmeas | 0.053 | 0.904 |
Rpim | 0.020 | 0.330 |
Number of reflections | 32097 | 1574 |
<I/σ(I)> | 38.7 | 2.5 |
Completeness [%] | 100.0 | 100 |
Redundancy | 7.2 | 7.3 |
CC(1/2) | 0.864 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 292 | Protein: 13.0 mg/ml, 0.5M Sodium chloride, 0.01M Tris-HCl pH 8.3; Screen: Classics II (C2), 1.1M Ammonium tartrate pH 7.0; Cryo: 4M Sodium formate. |