6MTT
Crystal structure of VRC46.01 Fab in complex with gp41 peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2017-06-10 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 1.000 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 124.602, 49.162, 99.967 |
Unit cell angles | 90.00, 97.10, 90.00 |
Refinement procedure
Resolution | 41.257 - 1.700 |
R-factor | 0.2357 |
Rwork | 0.235 |
R-free | 0.26480 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | homology model of VRC46.01 |
RMSD bond length | 0.004 |
RMSD bond angle | 0.755 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.730 |
High resolution limit [Å] | 1.700 | 1.700 |
Rmerge | 0.134 | 0.860 |
Rpim | 0.085 | 0.629 |
Number of reflections | 62955 | |
<I/σ(I)> | 12.1 | |
Completeness [%] | 94.7 | |
Redundancy | 3.9 | |
CC(1/2) | 0.757 | 0.306 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 20% PEG 3350, 0.2M potassium iodide |