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6MT1

Crystal structure of Inorganic Pyrophosphatase from Medicago truncatula (R3 crystal form)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-ID
Synchrotron siteAPS
Beamline19-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2017-04-06
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9793
Spacegroup nameH 3
Unit cell lengths81.784, 81.784, 176.935
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution40.890 - 1.840
R-factor0.16547
Rwork0.164
R-free0.20108
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)4lug
RMSD bond length0.013
RMSD bond angle1.519
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0230)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.950
High resolution limit [Å]1.8401.840
Rmerge0.0450.870
Rmeas0.0490.960
Number of reflections377645879
<I/σ(I)>17.221.7
Completeness [%]99.295.7
Redundancy5.65.4
CC(1/2)1.0000.790
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.62921.6% Tacsimate pH 5.0, 80 mM Na Citrate tribasic pH 5.6, 12.8% PEG 3350, 20% Glycerol Bromelain 5 ug/ml MtPPA1 7.7 mg/ml

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