6MQB
Crystal Structure of GTPase Domain of Human Septin 12 in complex with GMPPNP in Space Group C2221
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I24 |
Synchrotron site | Diamond |
Beamline | I24 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-10-15 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.96861 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 41.020, 91.860, 151.680 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.930 - 2.120 |
R-factor | 0.2022 |
Rwork | 0.200 |
R-free | 0.24840 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6mq9 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.477 |
Data reduction software | xia2 |
Data scaling software | xia2 |
Phasing software | PHASER |
Refinement software | PHENIX (1.10.1_2155) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.930 | 2.180 |
High resolution limit [Å] | 2.120 | 2.120 |
Rmerge | 0.135 | 1.042 |
Rpim | 0.063 | 0.480 |
Number of reflections | 16639 | 6492 |
<I/σ(I)> | 7.9 | 1.7 |
Completeness [%] | 99.5 | 99.5 |
Redundancy | 5.3 | 5.4 |
CC(1/2) | 0.994 | 0.580 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291 | 10% w/v PEG 8000, 20% v/v ethylene glycol, 0.1 M MES/imidazole pH 6.5 and 20mM of each: sodium formate, ammonium acetate, trisodium citrate, sodium potassium l-tartrate, sodium oxamate |